CaImAn
Developed by
FLATIRON Institute, New OrganizationComputational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
MRI, X-ray
Python, Scala
Application category
Description
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Date Created
2015-08-06T00:00:00.000Z
Date Updated
2024-02-02T00:00:00.000Z
Feature List
Citation DOI
https://doi.org/10.7554/eLife.38173
Application Category
Based On
https://github.com/irmlmaURL
Related Images
Executable Instructions
https://github.com/executable.md2
Executable Notebooks
Parameters
Software Image
Example/Demo data
Name
Name
Description
Description
Measurement Technique
Measurement TECHNIQUE
Variable Measured
Variable Measured
Content URL
https://bioimage.io/#/?type=model
Software requirements
Processor requirements
Operating systems
Video memory requirements
2 GB
Programming languages
Image modality
Accessible for free
Yes
Access conditions
Conditions of access
Technical documentation
https://github.com/irmlmaDOCUMENTATION
Producers
Persons and Organizations are temporally plot on the same table. This will be divided in two tables.
Funding
Acknowledgements
Acknowledgements go here
Maintainers
