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SPARTAN - MultiColorSPR

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Developed by

https://github.com/christian-7/MultiColorSPR

Code repository

Created: 22/12/2017

Published: 01/10/2018


fair level

This software has a level 2 in FAIR practice.

Overview

Accessory software to perform multi-color single particle reconstruction from SMLM datasets

Feature list

Application category


Processing


Technical Details

Operating systems

Programming languages


Contact & Support

Authors & publications

Suliana Manley

EPFL

Christian Sieben

EPFL

Niccolò Banterle

EPFL

Kyle M. Douglass

EPFL

Pierre Gönczy

EPFL

Funding

European Research Council

AdG 340227

ERC funding

European Union’s Horizon 2020 Framework Programme for Research and Innovation

grant agreement 665667

EPFL Fellows postdoctoral fellowship program

National Centre for Competence in Research

S.M.

Chemical Biology

Acknowledgements

C. Lehmann for growth, purification and AFM characterization of T4 bacteriophages. J.M. de la Rosa-Trevín for support regarding the optimal use of Scipion. and C.G. Morrison (Centre for Chromosome Biology, School of Natural Sciences and National University of Ireland Galway, Galway, Ireland) for providing the Cep164 antibody (1F3G10). B. Huang and X. Shi for providing their 2D particle-alignment code. We also thank R. Laine and C. Kaminski for providing an HSV SMLM dataset. M. Daszykowski for providing a public DBSCAN implementation.

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