DeconvolutionLab2

FAIR level 4

This fully-documented software should be easy to understand, as well as run and install, you're in good hands.

Developed by

http://bigwww.epfl.ch/deconvolution/deconvolutionlab2/

Java (ImageJ/Fiji) software package for 3D deconvolution microscopy

Any

Java

LibraryPluginDesktop app

https://spdx.org/licenses/GPL-3.0.html

Visit the website

Description

Java (ImageJ/Fiji) software package for 3D deconvolution microscopy

Date Created

2018-06-06T00:00:00.000Z

Date Updated

2017-01-03T00:00:00.000Z

Feature List

License

https://spdx.org/licenses/GPL-3.0.html

Citation DOI

https://doi.org/10.1016/j.ymeth.2016.12.015

Application Category

Is plugin or module of

Fiji

Related Images

README

https://github.com/Biomedical-Imaging-Group/DeconvolutionLab2/blob/master/README.md

Executable Instructions

https://bigwww.epfl.ch/deconvolution/deconvolutionlab2/

Parameters

Name	Description	Format	Encoding format	Description	Dimensionality	Default value	Required
PSF Generator	PSF Generator	tiff		PSF Generator	3		False

Example/Demo data

Name

C. elegans embryo

Description

C. Elegand Embryo

Measurement Technique

Fluorescence Microscopy

Variable Measured

CY3, FITC, DAPI

Content URL

https://bigwww.epfl.ch/deconvolution/bio/

Producers

Persons and Organizations are temporally plot on the same table. This will be divided in two tables.

Name	Affiliation	ORCID	Legal Name	ROR
Daniel Sage		https://orcid.org/0000-0002-1150-1623
Lauréne Donati		https://orcid.org/0000-0001-9834-7755
Ferréol Soulez		https://orcid.org/0000-0001-5678-1182
Denis Fortun		https://orcid.org/0000-0003-1275-4697

Funding

Organisation	Name of funds	Identifier
ERC	Grant agreement no 692726 "GlobalBioIm: Global integrative framework for computational bio-imaging"	Horizon 2020

Acknowledgements

Dr. Philippe Thévenaz for his useful feedback on the paper

Citation

https://doi.org/10.1016/j.ymeth.2016.12.015

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